The scverse project provides a computational ecosystem for single-cell omics data analysis

Isaac Virshup; Danila Bredikhin; Lukas Heumos; Giovanni Palla; Gregor Sturm; Adam Gayoso; Ilia Kats; Mikaela Koutrouli; Bonnie Berger; Dana Pe'er; Aviv Regev; Sarah A Teichmann; Francesca Finotello; F Alexander Wolf; Nir Yosef; Oliver Stegle; Fabian J Theis; Scverse Community

doi:10.1038/s41587-023-01733-8

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The scverse project provides a computational ecosystem for single-cell omics data analysis

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The scverse project provides a computational ecosystem for single-cell omics data analysis

Isaac Virshup, Danila Bredikhin, Lukas Heumos, Giovanni Palla, Gregor Sturm, Adam Gayoso, Ilia Kats, Mikaela Koutrouli, Bonnie Berger, Dana Pe'er, …

Nature biotechnology, Vol.41, pp.604-606

10/Apr/2023

DOI: https://doi.org/10.1038/s41587-023-01733-8

PMID: 37037904

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Title: The scverse project provides a computational ecosystem for single-cell omics data analysis
Creators: Isaac Virshup - Computational Health Center, Helmholtz Center Munich, Neuherberg, Germany. steering-council@scverse.org
Danila Bredikhin - Collaboration for joint PhD degree between EMBL and Heidelberg University, Faculty of Biosciences, Heidelberg, Germany. steering-council@scverse.org
Lukas Heumos - School of Life Sciences, Technical University of Munich, Munich, Germany. steering-council@scverse.org
Giovanni Palla - School of Life Sciences, Technical University of Munich, Munich, Germany
Gregor Sturm - University of Innsbruck
Adam Gayoso - University of California, Berkeley
Ilia Kats - German Cancer Research Center
Mikaela Koutrouli - University of Copenhagen
Bonnie Berger - Massachusetts Institute of Technology
Dana Pe'er - Howard Hughes Medical Institute
Aviv Regev - Massachusetts Institute of Technology
Sarah A Teichmann - University of Cambridge
Francesca Finotello - University of Innsbruck
F Alexander Wolf - Lamin Labs, Munich, Germany
Nir Yosef - 972WIS_INST___121
Oliver Stegle - Heidelberg University
Fabian J Theis - Helmholtz Zentrum München
Scverse Community
Resource Type: Journal article
Publication Details: Nature biotechnology, Vol.41, pp.604-606; 10/Apr/2023
Number of pages: 3
Language: English
DOI: https://doi.org/10.1038/s41587-023-01733-8
PMID: 37037904
Grant note: The authors would like to thank all scverse contributors who opened issues, contributed code or answered questions on scverse forums to guide novice and advanced users. D.B. acknowledges funding by the EMBL International PhD Programme and Darwin Trust Fellowship. G.S. was supported by a DOC fellowship from the Austrian Academy of Sciences. F.F. was supported by the Austrian Science Fund (FWF) (T 974-B30). G.P. is supported by the Helmholtz Association under the joint research school Munich School for Data Science.
Record Identifier: 993438357003596

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